cas package
===========

Subpackages
-----------

.. toctree::
   :maxdepth: 4

   cas.accession
   cas.ingest
   cas.linkml_ops
   cas.matrix_file
   cas.utils

Submodules
----------

cas.abc\_cas\_converter module
------------------------------

.. automodule:: cas.abc_cas_converter
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cas.add\_author\_annotations module
-----------------------------------

.. automodule:: cas.add_author_annotations
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cas.anndata\_conversion module
------------------------------

.. automodule:: cas.anndata_conversion
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cas.anndata\_splitter module
----------------------------

.. automodule:: cas.anndata_splitter
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cas.anndata\_to\_cas module
---------------------------

.. automodule:: cas.anndata_to_cas
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cas.cas\_splitter module
------------------------

.. automodule:: cas.cas_splitter
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cas.cas\_to\_rdf module
-----------------------

.. automodule:: cas.cas_to_rdf
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cas.cxg\_utils module
---------------------

.. automodule:: cas.cxg_utils
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cas.file\_utils module
----------------------

.. automodule:: cas.file_utils
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cas.flatten\_data\_to\_anndata module
-------------------------------------

.. automodule:: cas.flatten_data_to_anndata
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cas.flatten\_data\_to\_tables module
------------------------------------

.. automodule:: cas.flatten_data_to_tables
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cas.model module
----------------

.. automodule:: cas.model
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cas.populate\_cell\_ids module
------------------------------

.. automodule:: cas.populate_cell_ids
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cas.reports module
------------------

.. automodule:: cas.reports
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cas.spreadsheet\_to\_cas module
-------------------------------

.. automodule:: cas.spreadsheet_to_cas
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cas.validate module
-------------------

.. automodule:: cas.validate
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Module contents
---------------

.. automodule:: cas
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