Welcome to cas-tools’s documentation!

Contents:

• CAS Tools
  • Installation
  • Overview
  • Getting Started
• CLI Operations
  • Validate CAS file
  • Export CAS to CAP Format in AnnData
  • Unflatten Operation
  • Convert spreadsheet to CAS
  • Convert AnnData to CAS
  • Convert ABC to CAS
  • Convert CAS to ABC
  • Merge CAS to AnnData file
  • Populate Cell IDs
  • Convert CAS data to RDF
  • Add Author Annotations to CAS JSON
  • Split CAS JSON by Cell Label
  • Split AnnData with CAS JSON
• cas-tools’s documentation!
  • cas package
  • cas.accession package
  • cas.linkml_ops package
  • cas.matrix_file package
  • cas.utils package
• Indices and tables

Indices and tables

• Index

• Module Index

• Search Page